Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is2 repressor tnpa | PFRI_19380 | Not Available | Negative | 1909161 - 1909556 | 14678.5 |
| ribosomal large subunit pseudouridine synthase a | PFRI_19390 | Not Available | Negative | 1909743 - 1910393 | 24321.7 |
| snoal-like domain protein | PFRI_19400 | Not Available | Positive | 1910470 - 1910880 | 15051.3 |
| eama-like transporter family protein | PFRI_19410 | Not Available | Negative | 1910877 - 1911773 | 32429.1 |
| 4-methylaminobutanoate oxidase (formaldehyde-forming) | PFRI_19420 | Not Available | Negative | 1911906 - 1914347 | 89678.8 |
| homocysteine s-methyltransferase | PFRI_19430 | Not Available | Negative | 1914361 - 1915257 | 31551.8 |
| hypothetical protein | PFRI_19440 | Not Available | Negative | 1915257 - 1915697 | 16448.1 |
| 4-methylaminobutanoate oxidase (formaldehyde-forming) | PFRI_19450 | Not Available | Negative | 1915694 - 1918144 | 90816.6 |
| glutathione-dependent formaldehyde-activating enzyme | PFRI_19460 | Not Available | Negative | 1918154 - 1918537 | 13603.9 |
| homoserine/homoserine lactone efflux protein | PFRI_19470 | Not Available | Negative | 1918534 - 1919154 | 21921.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
