Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rubrerythrin | PFRI_19280 | Not Available | Positive | 1899638 - 1900762 | 43060.4 |
| hypothetical protein | PFRI_19290 | Not Available | Positive | 1900762 - 1901568 | 29619.6 |
| 5-aminolevulinate synthase | PFRI_19300 | Not Available | Positive | 1901558 - 1902775 | 44337.9 |
| nmra-like family protein | PFRI_19310 | Not Available | Negative | 1902788 - 1903756 | 35224.6 |
| cytochrome c-551 precursor | PFRI_19320 | Not Available | Negative | 1903842 - 1904276 | 15541.7 |
| protoheme ix farnesyltransferase | PFRI_19330 | Not Available | Positive | 1904496 - 1905392 | 31867.5 |
| pucc protein | PFRI_19340 | Not Available | Positive | 1905394 - 1906680 | 44815.9 |
| putative oxidoreductasec | PFRI_19350 | Not Available | Positive | 1906684 - 1907862 | 42746.7 |
| isopentenyl-diphosphate delta-isomerase | PFRI_19360 | Not Available | Positive | 1907859 - 1908392 | 20157.1 |
| is66 orf2 like protein | PFRI_19370 | Not Available | Negative | 1908814 - 1909164 | 12738.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
