Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor 4 | PFRI_18780 | Not Available | Positive | 1848119 - 1850008 | 70668.5 |
| hypothetical protein | PFRI_18790 | Not Available | Negative | 1850035 - 1850508 | 18540.5 |
| glyceraldehyde-3-phosphate dehydrogenase 3 | PFRI_18800 | Not Available | Positive | 1850617 - 1851615 | 35890.7 |
| major facilitator superfamily protein | PFRI_18810 | Not Available | Positive | 1851558 - 1852838 | 45446.1 |
| isocitrate dehydrogenase | PFRI_18820 | Not Available | Negative | 1852884 - 1855073 | 77723.4 |
| 4-methylaminobutanoate oxidase (formaldehyde-forming) | PFRI_18830 | Not Available | Negative | 1855198 - 1856412 | 44890.6 |
| molybdopterin biosynthesis protein moeb | PFRI_18840 | Not Available | Negative | 1856409 - 1856801 | 14661.5 |
| formyl-coenzyme a transferase | PFRI_18850 | Not Available | Negative | 1856811 - 1857989 | 41842.1 |
| acyl-coa dehydrogenase fade12 | PFRI_18860 | Not Available | Negative | 1857990 - 1859141 | 42335.6 |
| hypothetical protein | PFRI_18870 | Not Available | Negative | 1859138 - 1859998 | 31899.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
