Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase subunit c | PFRI_18180 | Not Available | Negative | 1790716 - 1790940 | 7103.76 |
| atp synthase subunit a | PFRI_18190 | Not Available | Negative | 1791010 - 1791753 | 26645.6 |
| atp synthase protein i | PFRI_18200 | Not Available | Negative | 1791757 - 1792086 | 11974.5 |
| transcriptional repressor sdpr | PFRI_18210 | Not Available | Positive | 1792307 - 1792630 | 11959.4 |
| hypothetical protein | PFRI_18220 | Not Available | Negative | 1792651 - 1793259 | 22490.7 |
| glcnac-pi de-n-acetylase | PFRI_18230 | Not Available | Negative | 1793272 - 1794582 | 48071.7 |
| trna (cytidine(34)-2'-o)-methyltransferase | PFRI_18240 | Not Available | Positive | 1794803 - 1795261 | 17291.7 |
| acetyltransferase | PFRI_18250 | Not Available | Negative | 1795270 - 1795764 | 17609.9 |
| 2-(s)-hydroxypropyl-com dehydrogenase | PFRI_18260 | Not Available | Negative | 1795761 - 1796507 | 26356.6 |
| pyruvate dehydrogenase complex repressor | PFRI_18270 | Not Available | Negative | 1796504 - 1797280 | 29015.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
