Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative amino-acid metabolite efflux pump | PFRI_17880 | Not Available | Negative | 1766336 - 1767217 | 31362.6 |
| zc3h12a-like ribonuclease nyn domain protein | PFRI_17890 | Not Available | Positive | 1767362 - 1767853 | 18631.8 |
| hypothetical protein | PFRI_17900 | Not Available | Positive | 1767983 - 1768324 | 11843.2 |
| ferric reductase like transmembrane component | PFRI_17910 | Not Available | Positive | 1768475 - 1769086 | 22106.1 |
| major facilitator superfamily protein | PFRI_17920 | Not Available | Positive | 1769202 - 1770386 | 40006.5 |
| 50s ribosomal protein l31 | PFRI_17930 | Not Available | Negative | 1770538 - 1770759 | 8106.64 |
| 50s ribosomal protein l19 | PFRI_17940 | Not Available | Negative | 1770771 - 1771145 | 13774.7 |
| trna (guanine-n(1)-)-methyltransferase | PFRI_17950 | Not Available | Negative | 1771197 - 1772018 | 30534.4 |
| secreted effector protein pipb2 | PFRI_17960 | Not Available | Negative | 1772020 - 1772703 | 24978.5 |
| ribosome maturation factor rimm | PFRI_17970 | Not Available | Negative | 1772704 - 1773210 | 17892.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
