Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PFRI_17780 | Not Available | Positive | 1756977 - 1757663 | 23358.1 |
| n-acetylmuramoyl-l-alanine amidase amid precursor | PFRI_17790 | Not Available | Positive | 1757671 - 1758354 | 24729.3 |
| carboxylesterase nlhh | PFRI_17800 | Not Available | Negative | 1758937 - 1759902 | 35505.9 |
| hth-type transcriptional regulator virs | PFRI_17810 | Not Available | Negative | 1760017 - 1760265 | 9679.32 |
| hypothetical protein | PFRI_17820 | Not Available | Positive | 1760452 - 1760757 | 11688.6 |
| beta-lactamase 2 precursor | PFRI_17830 | Not Available | Negative | 1760975 - 1761925 | 34856.9 |
| fumarylacetoacetate (faa) hydrolase family protein | PFRI_17840 | Not Available | Negative | 1761938 - 1763194 | 45098.1 |
| homogentisate 1,2-dioxygenase | PFRI_17850 | Not Available | Negative | 1763296 - 1764657 | 50585.9 |
| antiporter inner membrane protein | PFRI_17860 | Not Available | Negative | 1764764 - 1765573 | 29967.3 |
| hypothetical protein | PFRI_17870 | Not Available | Negative | 1765678 - 1766343 | 24961.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
