Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s13 | PFRI_17480 | Not Available | Positive | 1727976 - 1728344 | 13676.7 |
| 30s ribosomal protein s11 | PFRI_17490 | Not Available | Positive | 1728359 - 1728748 | 13634.3 |
| dna-directed rna polymerase subunit alpha | PFRI_17500 | Not Available | Positive | 1728862 - 1729878 | 36973.0 |
| 50s ribosomal protein l17 | PFRI_17510 | Not Available | Positive | 1730018 - 1730437 | 15660.0 |
| putative periplasmic serine endoprotease degp-like precursor | PFRI_17520 | Not Available | Positive | 1730633 - 1732015 | 48575.6 |
| replication-associated recombination protein a | PFRI_17530 | Not Available | Positive | 1732012 - 1733325 | 48323.6 |
| putative fluoride ion transporter crcb | PFRI_17540 | Not Available | Positive | 1733406 - 1733783 | 12844.4 |
| ribosomal large subunit pseudouridine synthase c | PFRI_17550 | Not Available | Positive | 1733780 - 1734823 | 38517.5 |
| pyrophosphatase ppax | PFRI_17560 | Not Available | Positive | 1734823 - 1735503 | 24335.2 |
| atp12 chaperone protein | PFRI_17570 | Not Available | Positive | 1735496 - 1736203 | 26370.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
