Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l6 | PFRI_17380 | Not Available | Positive | 1721622 - 1722155 | 19237.2 |
| 50s ribosomal protein l18 | PFRI_17390 | Not Available | Positive | 1722167 - 1722526 | 12870.7 |
| 30s ribosomal protein s5 | PFRI_17400 | Not Available | Positive | 1722644 - 1723213 | 20395.7 |
| 50s ribosomal protein l30 | PFRI_17410 | Not Available | Positive | 1723227 - 1723415 | 7035.85 |
| hypothetical protein | PFRI_17420 | Not Available | Negative | 1723418 - 1723540 | 4615.65 |
| metal-dependent hydrolase | PFRI_17430 | Not Available | Positive | 1723677 - 1724345 | 24533.1 |
| 8-oxo-dgtp diphosphatase | PFRI_17440 | Not Available | Negative | 1724607 - 1725020 | 15865.8 |
| 50s ribosomal protein l15 | PFRI_17450 | Not Available | Positive | 1725239 - 1725712 | 16377.1 |
| protein translocase subunit secy | PFRI_17460 | Not Available | Positive | 1725822 - 1727186 | 48775.8 |
| adenylate kinase | PFRI_17470 | Not Available | Positive | 1727183 - 1727764 | 20377.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
