Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase small subunit | PFRI_16680 | Not Available | Negative | 1665275 - 1666297 | 36866.3 |
| 3-isopropylmalate dehydratase large subunit | PFRI_16690 | Not Available | Negative | 1666297 - 1667700 | 50407.1 |
| hypothetical protein | PFRI_16700 | Not Available | Negative | 1667967 - 1668428 | 15412.5 |
| flagellar motor switch protein flig | PFRI_16710 | Not Available | Positive | 1668509 - 1669219 | 25684.6 |
| nitrile hydratase subunit beta | PFRI_16720 | Not Available | Positive | 1669271 - 1669615 | 12864.9 |
| nitrile hydratase subunit beta | PFRI_16730 | Not Available | Positive | 1669590 - 1669907 | 11658.8 |
| low-molecular weight cobalt-containing nitrile hydratase subunit alpha | PFRI_16740 | Not Available | Positive | 1669897 - 1670538 | 23613.1 |
| lipid a biosynthesis lauroyl acyltransferase | PFRI_16750 | Not Available | Positive | 1670570 - 1671430 | 31810.6 |
| hypothetical protein | PFRI_16760 | Not Available | Negative | 1671434 - 1672123 | 24616.6 |
| aconitate hydratase 1 | PFRI_16770 | Not Available | Positive | 1672362 - 1675046 | 96602.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
