Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PFRI_01190 | Not Available | Positive | 121290 - 121670 | 14242.1 |
| peptidoglycan synthase ftsi | PFRI_01200 | Not Available | Positive | 121667 - 123451 | 64352.9 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | PFRI_01210 | Not Available | Positive | 123494 - 124975 | 51624.1 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | PFRI_01220 | Not Available | Positive | 124972 - 126417 | 49971.7 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | PFRI_01230 | Not Available | Positive | 126418 - 127500 | 38768.2 |
| arylmalonate decarboxylase | PFRI_01240 | Not Available | Positive | 127588 - 128385 | 28116.8 |
| acetylornithine deacetylase | PFRI_01250 | Not Available | Positive | 128382 - 129545 | 41020.0 |
| cystathionine beta-lyase metc | PFRI_01260 | Not Available | Positive | 129558 - 130712 | 41473.5 |
| putative n-methylproline demethylase | PFRI_01270 | Not Available | Positive | 130709 - 132742 | 72460.8 |
| putative hydrolase yxep | PFRI_01280 | Not Available | Positive | 132758 - 133900 | 40675.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
