Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lexa repressor | PFRI_16180 | Not Available | Positive | 1609854 - 1610552 | 25221.5 |
| comec family competence protein | PFRI_16190 | Not Available | Negative | 1610549 - 1612600 | 73027.8 |
| glutamate--trna ligase | PFRI_16200 | Not Available | Positive | 1612685 - 1614094 | 51363.1 |
| citrate synthase | PFRI_16210 | Not Available | Positive | 1614172 - 1615470 | 48442.6 |
| osmolarity sensor protein envz | PFRI_16220 | Not Available | Negative | 1615525 - 1616844 | 49128.6 |
| putative polyketide biosynthesis zinc-dependent hydrolase baeb | PFRI_16230 | Not Available | Positive | 1616886 - 1617791 | 32048.2 |
| Trna-asn | Not Available | Not Available | Positive | 1617873 - 1617947 | Not Available |
| hypothetical protein | PFRI_16250 | Not Available | Positive | 1618117 - 1620093 | 74041.5 |
| tyrosine recombinase xerd | PFRI_16260 | Not Available | Positive | 1620502 - 1621362 | 32278.2 |
| putative transposase | PFRI_16270 | Not Available | Positive | 1621622 - 1622569 | 35233.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
