Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator kdgr | PFRI_15890 | Not Available | Negative | 1578638 - 1579456 | 29707.6 |
| multiple sugar-binding protein precursor | PFRI_15900 | Not Available | Positive | 1579673 - 1580938 | 46582.7 |
| lactose transport system permease protein lacf | PFRI_15910 | Not Available | Positive | 1581059 - 1581988 | 35435.7 |
| l-arabinose transport system permease protein araq | PFRI_15920 | Not Available | Positive | 1581988 - 1582836 | 31763.6 |
| alpha-galactosidase | PFRI_15930 | Not Available | Positive | 1582838 - 1584919 | 78170.3 |
| d-xylose 1-dehydrogenase | PFRI_15940 | Not Available | Positive | 1585017 - 1585781 | 27449.7 |
| putative 2-dehydro-3-deoxygalactonokinase dgok1 | PFRI_15950 | Not Available | Positive | 1585778 - 1586695 | 32141.2 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | PFRI_15960 | Not Available | Positive | 1586698 - 1587306 | 20624.2 |
| l-arabinolactonase | PFRI_15970 | Not Available | Positive | 1587303 - 1588136 | 30252.6 |
| beta-galactosidase | PFRI_15980 | Not Available | Positive | 1588133 - 1590049 | 71791.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
