Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit n | PFRI_15190 | Not Available | Positive | 1514639 - 1516081 | 50949.5 |
| bifunctional ligase/repressor bira | PFRI_15200 | Not Available | Positive | 1516071 - 1516829 | 26721.2 |
| type iii pantothenate kinase | PFRI_15210 | Not Available | Positive | 1516845 - 1517618 | 27743.2 |
| ribonuclease j 1 | PFRI_15220 | Not Available | Positive | 1517625 - 1519292 | 60602.0 |
| transcriptional regulator slya | PFRI_15230 | Not Available | Negative | 1519296 - 1519763 | 17324.2 |
| hypothetical protein | PFRI_15240 | Not Available | Positive | 1520033 - 1520419 | 13673.2 |
| atp-dependent rna helicase rhle | PFRI_15250 | Not Available | Negative | 1520479 - 1521942 | 53765.8 |
| hypothetical protein | PFRI_15260 | Not Available | Negative | 1522152 - 1522778 | 23522.1 |
| lipoyl synthase | PFRI_15270 | Not Available | Positive | 1522973 - 1523917 | 34821.7 |
| serralysin precursor | PFRI_15280 | Not Available | Positive | 1524018 - 1525076 | 38164.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
