Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative hydrolase yxep | PFRI_14890 | Not Available | Positive | 1486847 - 1488013 | 42083.9 |
| hypothetical protein | PFRI_14900 | Not Available | Positive | 1488081 - 1488875 | 30092.8 |
| acyl-coa dehydrogenase | PFRI_14910 | Not Available | Positive | 1489000 - 1490163 | 42219.7 |
| hypothetical protein | PFRI_14920 | Not Available | Positive | 1490163 - 1490471 | 11130.1 |
| acetyl-coenzyme a synthetase | PFRI_14930 | Not Available | Positive | 1490473 - 1492014 | 55804.0 |
| methylmalonyl-coa carboxyltransferase 12s subunit | PFRI_14940 | Not Available | Positive | 1492011 - 1493615 | 57281.4 |
| acetyl-/propionyl-coenzyme a carboxylase alpha chain | PFRI_14950 | Not Available | Positive | 1493681 - 1495627 | 68762.1 |
| hypothetical protein | PFRI_14960 | Not Available | Positive | 1495624 - 1496301 | 25281.3 |
| hydroxymethylglutaryl-coa lyase yngg | PFRI_14970 | Not Available | Positive | 1496298 - 1497161 | 29920.7 |
| putative enoyl-coa hydratase echa8 | PFRI_14980 | Not Available | Positive | 1497158 - 1497949 | 27916.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
