Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor rpoh | PFRI_14790 | Not Available | Positive | 1475359 - 1476255 | 33963.5 |
| hypothetical protein | PFRI_14800 | Not Available | Negative | 1476489 - 1476788 | 10762.1 |
| oligopeptide transport system permease protein oppc | PFRI_14810 | Not Available | Negative | 1476745 - 1477719 | 35771.5 |
| dipeptide transport system permease protein dppb | PFRI_14820 | Not Available | Negative | 1477712 - 1478719 | 37946.8 |
| glutathione-binding protein gsib precursor | PFRI_14830 | Not Available | Negative | 1478852 - 1480555 | 61202.0 |
| glutathione import atp-binding protein gsia | PFRI_14840 | Not Available | Positive | 1480884 - 1482704 | 66790.3 |
| glyoxalase-like domain protein | PFRI_14850 | Not Available | Positive | 1482706 - 1483080 | 13909.5 |
| acetylornithine deacetylase | PFRI_14860 | Not Available | Positive | 1483088 - 1484260 | 43027.2 |
| n-methyl-l-tryptophan oxidase | PFRI_14870 | Not Available | Positive | 1484260 - 1485600 | 47782.6 |
| putative hydrolase yxep | PFRI_14880 | Not Available | Positive | 1485658 - 1486833 | 41701.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
