Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trehalose import atp-binding protein sugc | PFRI_00990 | Not Available | Positive | 100131 - 101228 | 39608.3 |
| maltose/maltodextrin import atp-binding protein malk | PFRI_01000 | Not Available | Positive | 101221 - 102216 | 36023.1 |
| dihydroxyacetone kinase | PFRI_01010 | Not Available | Positive | 102227 - 103846 | 55155.4 |
| fructose-1,6-bisphosphatase class 1 | PFRI_01020 | Not Available | Positive | 103848 - 104111 | 9458.13 |
| inosine-5'-monophosphate dehydrogenase | PFRI_01030 | Not Available | Negative | 104217 - 104651 | 15972.4 |
| hypothetical protein | PFRI_01040 | Not Available | Negative | 104648 - 105151 | 18296.2 |
| 2-oxoglutarate carboxylase small subunit | PFRI_01050 | Not Available | Negative | 105449 - 108892 | 125658.0 |
| l-lactate dehydrogenase | PFRI_01060 | Not Available | Negative | 109045 - 110196 | 41953.0 |
| dna helicase ii | PFRI_01070 | Not Available | Positive | 110301 - 112757 | 90906.5 |
| act domain protein | PFRI_01080 | Not Available | Positive | 112770 - 113171 | 14382.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
