Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sialic acid trap transporter permease protein siat | PFRI_14590 | Not Available | Negative | 1454740 - 1456035 | 45043.4 |
| tripartite atp-independent periplasmic transporter, dctq component | PFRI_14600 | Not Available | Negative | 1456032 - 1456628 | 22372.9 |
| sialic acid-binding periplasmic protein siap precursor | PFRI_14610 | Not Available | Negative | 1456669 - 1457676 | 35943.4 |
| 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase | PFRI_14620 | Not Available | Negative | 1457739 - 1458797 | 37562.8 |
| dna-binding transcriptional regulator csir | PFRI_14630 | Not Available | Positive | 1458954 - 1459628 | 25306.2 |
| dna-binding transcriptional repressor mali | PFRI_14640 | Not Available | Negative | 1459634 - 1460665 | 37452.1 |
| phytanoyl-coa dioxygenase (phyh) | PFRI_14650 | Not Available | Positive | 1460749 - 1461930 | 42962.6 |
| arylesterase | PFRI_14660 | Not Available | Negative | 1461960 - 1462682 | 26059.4 |
| glycine betaine transport system permease protein opuab | PFRI_14670 | Not Available | Negative | 1462679 - 1464220 | 55787.9 |
| glycine betaine/l-proline transport atp-binding protein prov | PFRI_14680 | Not Available | Negative | 1464217 - 1465272 | 38541.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
