Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate synthase large chain | PFRI_14390 | Not Available | Negative | 1431847 - 1433193 | 47690.1 |
| gxgxg motif protein | PFRI_14400 | Not Available | Negative | 1433205 - 1433888 | 23654.9 |
| glutamine--fructose-6-phosphate aminotransferase | PFRI_14410 | Not Available | Negative | 1433889 - 1434818 | 33296.5 |
| ammonium transporter nrga | PFRI_14420 | Not Available | Positive | 1434936 - 1436438 | 53079.1 |
| hypothetical protein | PFRI_14430 | Not Available | Positive | 1436465 - 1436635 | 5968.33 |
| aminomethyltransferase | PFRI_14440 | Not Available | Positive | 1436790 - 1437938 | 42250.2 |
| hypothetical protein | PFRI_14450 | Not Available | Positive | 1438004 - 1438600 | 21781.0 |
| phthalate 4,5-dioxygenase oxygenase reductase subunit | PFRI_14460 | Not Available | Positive | 1438597 - 1439559 | 35525.4 |
| hypothetical protein | PFRI_14470 | Not Available | Positive | 1439569 - 1440636 | 41773.5 |
| hth-type transcriptional repressor rghr | PFRI_14480 | Not Available | Negative | 1440678 - 1441337 | 23966.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
