Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine recombinase xerd | PFRI_13390 | Not Available | Positive | 1325970 - 1326914 | 34890.0 |
| calcineurin-like phosphoesterase superfamily domain protein | PFRI_13400 | Not Available | Negative | 1326911 - 1327696 | 28196.4 |
| magnesium and cobalt efflux protein corc | PFRI_13410 | Not Available | Positive | 1327765 - 1329072 | 47833.6 |
| uvrabc system protein a | PFRI_13420 | Not Available | Negative | 1329075 - 1331939 | 106037.0 |
| major facilitator superfamily protein | PFRI_13430 | Not Available | Negative | 1332043 - 1333290 | 44427.4 |
| hypothetical protein | PFRI_13440 | Not Available | Negative | 1333274 - 1333834 | 21621.8 |
| dihydrolipoyl dehydrogenase | PFRI_13450 | Not Available | Negative | 1333844 - 1335238 | 49377.9 |
| hypothetical protein | PFRI_13460 | Not Available | Negative | 1335345 - 1335929 | 22522.6 |
| putative mfs-type transporter ycad | PFRI_13470 | Not Available | Negative | 1336023 - 1337246 | 42951.2 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | PFRI_13480 | Not Available | Negative | 1337387 - 1338445 | 38426.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
