Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine synthetase 1 | PFRI_13290 | Not Available | Positive | 1316594 - 1318000 | 52425.8 |
| hypothetical protein | PFRI_13300 | Not Available | Negative | 1318255 - 1319085 | 29721.3 |
| alpha/beta hydrolase family protein | PFRI_13310 | Not Available | Positive | 1319208 - 1320278 | 38169.8 |
| soluble lytic murein transglycosylase precursor | PFRI_13320 | Not Available | Negative | 1320307 - 1320918 | 22373.8 |
| single-stranded dna-binding protein | PFRI_13330 | Not Available | Positive | 1321100 - 1321651 | 19133.9 |
| hypothetical protein | PFRI_13340 | Not Available | Positive | 1321779 - 1322486 | 24846.0 |
| 3-dehydroquinate synthase | PFRI_13350 | Not Available | Negative | 1322492 - 1323607 | 39895.2 |
| shikimate kinase 1 | PFRI_13360 | Not Available | Negative | 1323600 - 1324151 | 19804.1 |
| hypothetical protein | PFRI_13370 | Not Available | Positive | 1324272 - 1324436 | 6025.56 |
| hypothetical protein | PFRI_13380 | Not Available | Positive | 1324423 - 1325973 | 55051.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
