Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginase | PFRI_12800 | Not Available | Negative | 1272572 - 1273498 | 32962.4 |
| dna-binding transcriptional regulator asnc | PFRI_12810 | Not Available | Positive | 1273638 - 1274066 | 15429.8 |
| glutamate synthase large chain | PFRI_12820 | Not Available | Negative | 1274182 - 1275726 | 54410.0 |
| vibriobactin utilization protein viub | PFRI_12830 | Not Available | Negative | 1275850 - 1276668 | 29852.4 |
| hypothetical protein | PFRI_12840 | Not Available | Negative | 1276757 - 1277149 | 13524.4 |
| hypothetical protein | PFRI_12850 | Not Available | Negative | 1277255 - 1277821 | 19696.2 |
| hypothetical protein | PFRI_12860 | Not Available | Negative | 1277836 - 1278135 | 11210.1 |
| hth-type transcriptional regulator dmlr | PFRI_12870 | Not Available | Positive | 1278270 - 1279175 | 33451.1 |
| hypothetical protein | PFRI_12880 | Not Available | Positive | 1279356 - 1280516 | 40702.6 |
| sialic acid trap transporter permease protein siat | PFRI_12890 | Not Available | Positive | 1280592 - 1282568 | 69963.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
