Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemolysin, chromosomal | PFRI_12700 | Not Available | Negative | 1260208 - 1261287 | 37195.3 |
| putative gamma-glutamyltransferase ywrd | PFRI_12710 | Not Available | Positive | 1261489 - 1263084 | 56266.8 |
| 2,3-dimethylmalate lyase | PFRI_12720 | Not Available | Negative | 1263146 - 1264009 | 30445.1 |
| peroxyureidoacrylate/ureidoacrylate amidohydrolase rutb | PFRI_12730 | Not Available | Negative | 1264006 - 1264626 | 22203.6 |
| acetophenone carboxylase gamma subunit | PFRI_12740 | Not Available | Negative | 1264623 - 1266686 | 72718.1 |
| acetophenone carboxylase delta subunit | PFRI_12750 | Not Available | Negative | 1266683 - 1268377 | 60042.6 |
| hth-type transcriptional repressor yvoa | PFRI_12760 | Not Available | Positive | 1268574 - 1269395 | 29617.6 |
| 3-isopropylmalate dehydratase large subunit | PFRI_12770 | Not Available | Positive | 1269392 - 1270786 | 49607.4 |
| 3-isopropylmalate dehydratase small subunit | PFRI_12780 | Not Available | Positive | 1270786 - 1271409 | 22517.5 |
| l-lysine cyclodeaminase | PFRI_12790 | Not Available | Negative | 1271468 - 1272532 | 38513.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
