Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PFRI_11610 | Not Available | Negative | 1166377 - 1166553 | 7151.68 |
| type iv secretion system protein virb11 | PFRI_11620 | Not Available | Negative | 1166857 - 1167837 | 35394.4 |
| type iv secretion system protein ptlg | PFRI_11630 | Not Available | Negative | 1167834 - 1169264 | 50212.6 |
| type iv secretion system protein virb9 precursor | PFRI_11640 | Not Available | Negative | 1169267 - 1169998 | 27259.9 |
| type iv secretion system protein virb8 | PFRI_11650 | Not Available | Negative | 1170003 - 1170674 | 24798.1 |
| trbl/virb6 plasmid conjugal transfer protein | PFRI_11660 | Not Available | Negative | 1170694 - 1171707 | 34532.2 |
| hypothetical protein | PFRI_11670 | Not Available | Negative | 1171711 - 1172127 | 15173.3 |
| type iv secretion system protein | PFRI_11680 | Not Available | Negative | 1172127 - 1172894 | 26716.8 |
| soluble lytic murein transglycosylase precursor | PFRI_11690 | Not Available | Negative | 1172891 - 1174003 | 39814.3 |
| hypothetical protein | PFRI_11700 | Not Available | Negative | 1174000 - 1174206 | 7183.56 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
