Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PFRI_10830 | Not Available | Positive | 1096130 - 1096399 | 9353.31 |
| putative l,d-transpeptidase ynhg precursor | PFRI_10840 | Not Available | Negative | 1096438 - 1097100 | 24383.8 |
| 4-hydroxy-tetrahydrodipicolinate synthase | PFRI_11030 | Not Available | Negative | 1114899 - 1115798 | 31816.2 |
| threonine efflux protein | PFRI_11040 | Not Available | Negative | 1115812 - 1116447 | 22196.5 |
| arginine exporter protein argo | PFRI_11050 | Not Available | Negative | 1116459 - 1117070 | 22071.5 |
| putative hth-type transcriptional regulatorc | PFRI_11060 | Not Available | Positive | 1117166 - 1118071 | 33230.7 |
| serine/threonine-protein kinase hipa | PFRI_11070 | Not Available | Negative | 1118331 - 1119647 | 47768.0 |
| helix-turn-helix protein | PFRI_11080 | Not Available | Negative | 1119637 - 1119879 | 8803.51 |
| hypothetical protein | PFRI_11090 | Not Available | Positive | 1120531 - 1120869 | 12097.3 |
| hypothetical protein | PFRI_11100 | Not Available | Negative | 1121035 - 1121283 | 8684.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
