Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PFRI_10730 | Not Available | Negative | 1084095 - 1084706 | 22641.9 |
| phage integrase family protein | PFRI_10740 | Not Available | Negative | 1084814 - 1086358 | 58274.0 |
| transposase, mutator family | PFRI_10750 | Not Available | Positive | 1087074 - 1088288 | 45579.7 |
| cadmium, cobalt and zinc/h/k antiporter | PFRI_10760 | Not Available | Negative | 1088360 - 1089274 | 33247.9 |
| sialic acid trap transporter permease protein siat | PFRI_10770 | Not Available | Negative | 1089559 - 1090932 | 48565.5 |
| tripartite atp-independent periplasmic transporter, dctq component | PFRI_10780 | Not Available | Negative | 1090922 - 1091443 | 19302.0 |
| lipoprotein signal peptidase | PFRI_10790 | Not Available | Negative | 1091481 - 1091990 | 18255.2 |
| cadmium, cobalt and zinc/h/k antiporter | PFRI_10800 | Not Available | Negative | 1091987 - 1092835 | 29828.4 |
| hth-type transcriptional repressor smtb | PFRI_10810 | Not Available | Positive | 1092892 - 1093242 | 12744.4 |
| putative cadmium-transporting atpase | PFRI_10820 | Not Available | Negative | 1093535 - 1095877 | 80933.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
