Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sialic acid trap transporter permease protein siat | PFRI_10320 | Not Available | Positive | 1044352 - 1045848 | 53001.5 |
| bile acid 7-dehydroxylase 2 | PFRI_10330 | Not Available | Positive | 1045872 - 1046636 | 26473.8 |
| 2,3-dehydroadipyl-coa hydratase | PFRI_10340 | Not Available | Positive | 1046641 - 1047402 | 27426.1 |
| carboxylic acid reductase | PFRI_10350 | Not Available | Positive | 1047439 - 1049241 | 64556.3 |
| amidohydrolase | PFRI_10360 | Not Available | Positive | 1049238 - 1050113 | 33253.7 |
| 4-hydroxybenzoate--coa/benzoate--coa ligase | PFRI_10370 | Not Available | Positive | 1050220 - 1051755 | 56164.6 |
| putative aminoacrylate hydrolase rutd | PFRI_10380 | Not Available | Positive | 1051752 - 1052567 | 29301.8 |
| hypothetical protein | PFRI_10390 | Not Available | Positive | 1052564 - 1053001 | 16254.7 |
| benzoyl-coa-dihydrodiol lyase | PFRI_10400 | Not Available | Positive | 1053145 - 1054803 | 61545.9 |
| benzoyl-coa oxygenase component b | PFRI_10410 | Not Available | Positive | 1054835 - 1056286 | 54760.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
