Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator iscr | PFRI_09820 | Not Available | Positive | 996549 - 996977 | 15234.3 |
| cysteine desulfurase nifs | PFRI_09830 | Not Available | Positive | 996977 - 998020 | 36225.3 |
| fes cluster assembly protein sufb | PFRI_09840 | Not Available | Positive | 998044 - 999579 | 56867.1 |
| hypothetical protein | PFRI_09850 | Not Available | Positive | 999590 - 999766 | 6087.83 |
| hypothetical protein | PFRI_09860 | Not Available | Positive | 999763 - 1000038 | 9642.54 |
| hypothetical protein | PFRI_09870 | Not Available | Positive | 1000118 - 1000678 | 20930.9 |
| putative atp-dependent transporter sufc | PFRI_09880 | Not Available | Positive | 1000711 - 1001466 | 27421.2 |
| fes cluster assembly protein sufd | PFRI_09890 | Not Available | Positive | 1001467 - 1002747 | 46264.2 |
| hypothetical protein | PFRI_09900 | Not Available | Positive | 1002747 - 1003229 | 17635.1 |
| yip1 domain protein | PFRI_09910 | Not Available | Positive | 1003229 - 1003816 | 21087.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
