Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclic-guanylate-specific phosphodiesterase pdef | UMNK88_RS15455 | Not Available | Negative | 3001010 - 3002800 | 68740.4 |
| Hypothetical protein | UMNK88_RS34215 | Not Available | Negative | 3002982 - 3003134 | 5689.89 |
| Hypothetical protein | UMNK88_RS15465 | Not Available | Positive | 3003152 - 3003343 | 7462.05 |
| Putative outer membrane lipoprotein | UMNK88_RS15470 | Not Available | Positive | 3003654 - 3004172 | 17706.1 |
| Hypothetical protein | UMNK88_RS15475 | Not Available | Positive | 3004188 - 3004727 | 20231.4 |
| Attl | Not Available | Not Available | Positive | 3004818 - 3004834 | Not Available |
| Putative spanin | UMNK88_RS15480 | Not Available | Negative | 3004931 - 3005419 | 18236.4 |
| Putative endolysin | UMNK88_RS15485 | Not Available | Negative | 3005416 - 3006045 | 23031.5 |
| Putative holin | UMNK88_RS15490 | Not Available | Negative | 3006035 - 3006343 | 11375.3 |
| Hypothetical protein | UMNK88_RS15495 | Not Available | Negative | 3006330 - 3006734 | 14214.4 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





