Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein traf | UMNK88_RS27405 | Not Available | Negative | 71245 - 72447 | 43182.1 |
| conjugal transfer protein trae | UMNK88_RS27410 | Not Available | Negative | 72533 - 73357 | 30946.3 |
| tyrosine-type recombinase/integrase | UMNK88_RS27415 | Not Available | Negative | 73508 - 74662 | 44230.6 |
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | UMNK88_RS27425 | Not Available | Negative | 74974 - 76308 | 46930.0 |
| a24 family peptidase | UMNK88_RS27430 | Not Available | Negative | 76308 - 76964 | 24567.9 |
| lytic transglycosylase domain-containing protein | UMNK88_RS27435 | Not Available | Negative | 76949 - 77509 | 20823.6 |
| type 4 pilus major pilin | UMNK88_RS27440 | Not Available | Negative | 77519 - 78133 | 21260.3 |
| type ii secretion system f family protein | UMNK88_RS27445 | Not Available | Negative | 78150 - 79235 | 40638.8 |
| gspe/pule family protein | UMNK88_RS27450 | Not Available | Negative | 79248 - 80801 | 58127.1 |
| type iv pilus biogenesis protein pilp | UMNK88_RS27455 | Not Available | Negative | 80812 - 81264 | 16073.3 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





