Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Host killer protein | UMNK88_RS12305 | Not Available | Negative | 2370454 - 2370609 | 5737.24 |
| Putative metal-binding domain-containing protein | UMNK88_RS12315 | Not Available | Positive | 2371234 - 2372043 | 30617.9 |
| Lygf | UMNK88_RS12320 | Not Available | Negative | 2372190 - 2372612 | 16368.8 |
| Primosomal protein i | UMNK88_RS12325 | Not Available | Negative | 2372653 - 2373723 | 39711.2 |
| Cii protein | UMNK88_RS12330 | Not Available | Negative | 2373795 - 2374220 | 15829.0 |
| Putative cro anti-repressor | UMNK88_RS12335 | Not Available | Negative | 2374204 - 2374447 | 8529.26 |
| Putative lambda repressor | UMNK88_RS33880 | Not Available | Positive | 2374839 - 2375177 | 11844.4 |
| Hypothetical protein | UMNK88_RS12345 | Not Available | Positive | 2375470 - 2375625 | 5761.75 |
| protein ydfb | UMNK88_RS35270 | Not Available | Positive | 2375627 - 2375755 | 4687.35 |
| protein ydfc | UMNK88_RS12350 | Not Available | Positive | 2375785 - 2376003 | 8393.01 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





