Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Prohead protease | UMNK88_RS12205 | Not Available | Negative | 2358506 - 2359156 | 23977.5 |
| Portal protein | UMNK88_RS12210 | Not Available | Negative | 2359134 - 2360375 | 46244.1 |
| Putative integral membrane protein | UMNK88_RS12215 | Not Available | Negative | 2360375 - 2360557 | 6407.14 |
| Terminase large subunit | UMNK88_RS12220 | Not Available | Negative | 2360569 - 2362326 | 66208.1 |
| Terminase small subunit | UMNK88_RS12225 | Not Available | Negative | 2362326 - 2362808 | 17857.5 |
| Hypothetical protein | UMNK88_RS12230 | Not Available | Negative | 2362956 - 2363306 | 13155.7 |
| Putative endolysin | UMNK88_RS12235 | Not Available | Negative | 2363546 - 2363923 | 14128.9 |
| Putative holin | UMNK88_RS12240 | Not Available | Negative | 2363926 - 2364201 | 10513.5 |
| Putative holin | UMNK88_RS12245 | Not Available | Negative | 2364191 - 2364583 | 13144.1 |
| Hypothetical protein | UMNK88_RS29515 | Not Available | Negative | 2364674 - 2364826 | 5350.06 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





