Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative transcriptional repressor dica | UMNK88_RS10000 | Not Available | Positive | 1944078 - 1944485 | 15706.0 |
| Hypothetical protein | UMNK88_RS10005 | Not Available | Positive | 1944652 - 1944807 | 5792.67 |
| protein ydfb | UMNK88_RS35255 | Not Available | Positive | 1944809 - 1944937 | 4688.29 |
| protein ydfc | UMNK88_RS10010 | Not Available | Positive | 1944967 - 1945185 | 8350.92 |
| cell division inhibition protein dicb | UMNK88_RS10015 | Not Available | Positive | 1945745 - 1945933 | 6964.7 |
| lysis protein ydfd | UMNK88_RS10020 | Not Available | Positive | 1945930 - 1946121 | 6842.35 |
| 3'-5' exoribonuclease | UMNK88_RS34780 | Not Available | Positive | 1946214 - 1948683 | 91691.4 |
| Bacteriophage excisionase | UMNK88_RS10030 | Not Available | Positive | 1948756 - 1949007 | 9742.79 |
| Putative integrase | UMNK88_RS10035 | Not Available | Positive | 1949042 - 1950322 | 48373.3 |
| Attr | Not Available | Not Available | Positive | 1950466 - 1950477 | Not Available |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





