Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flxa-like family protein | UMNK88_RS09955 | Not Available | Positive | 1937748 - 1938080 | 12208.4 |
| protein ydfw | UMNK88_RS34775 | Not Available | Negative | 1938517 - 1938666 | 5881.1 |
| isncy family transposase | UMNK88_RS09960 | Not Available | Negative | 1938739 - 1939830 | 42175.5 |
| Hypothetical protein | UMNK88_RS34365 | Not Available | Negative | 1940465 - 1940886 | 15463.2 |
| Hypothetical protein | UMNK88_RS35405 | Not Available | Negative | 1941052 - 1941234 | 6823.63 |
| Methyltransferase | UMNK88_RS09975 | Not Available | Negative | 1941364 - 1941853 | 18603.4 |
| Lygf | UMNK88_RS09980 | Not Available | Negative | 1941850 - 1942272 | 16256.5 |
| Replication protein | UMNK88_RS09985 | Not Available | Negative | 1942313 - 1943278 | 36962.9 |
| toxin ydat family protein | UMNK88_RS09990 | Not Available | Negative | 1943259 - 1943780 | 19925.9 |
| Putative cro anti-repressor | UMNK88_RS09995 | Not Available | Negative | 1943764 - 1943994 | 8578.22 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





