Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| doti/icml family type iv secretion protein | UMNK88_RS27355 | Not Available | Negative | 60711 - 61403 | 25562.4 |
| conjugal transfer protein | UMNK88_RS27360 | Not Available | Negative | 61400 - 61747 | 12364.6 |
| lpd7 domain-containing protein | UMNK88_RS27365 | Not Available | Negative | 61765 - 65532 | 137746.0 |
| phospholipase d family protein | UMNK88_RS27370 | Not Available | Negative | 65622 - 66173 | 20253.3 |
| hypothetical protein | UMNK88_RS31785 | Not Available | Negative | 66188 - 66478 | 11312.9 |
| plasmid transfer atpase traj | UMNK88_RS27375 | Not Available | Negative | 66475 - 67623 | 42541.3 |
| inci1-type conjugal transfer lipoprotein trai | UMNK88_RS27380 | Not Available | Negative | 67620 - 68438 | 30549.5 |
| ash family protein | UMNK88_RS27385 | Not Available | Negative | 68435 - 68800 | 13700.3 |
| is3-like element is1203 family transposase | UMNK88_RS27390 | Not Available | Negative | 68837 - 70050 | 46098.8 |
| histidine phosphatase family protein | UMNK88_RS27400 | Not Available | Negative | 70601 - 71185 | 21973.4 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





