Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold shock-like protein cspf | UMNK88_RS09920 | Not Available | Positive | 1933198 - 1933410 | 7563.18 |
| hypothetical protein | UMNK88_RS33840 | Not Available | Positive | 1933465 - 1933554 | 3193.12 |
| Antitermination protein q | UMNK88_RS09925 | Not Available | Negative | 1933832 - 1934584 | 27926.8 |
| Hypothetical protein | UMNK88_RS09930 | Not Available | Negative | 1934598 - 1935647 | 39291.5 |
| Hypothetical protein | UMNK88_RS30395 | Not Available | Negative | 1935649 - 1935927 | 11140.2 |
| protein rem | UMNK88_RS09935 | Not Available | Negative | 1935994 - 1936245 | 9235.26 |
| Host killer protein | UMNK88_RS09940 | Not Available | Negative | 1936462 - 1936617 | 5737.24 |
| type ii toxin-antitoxin system mrna interferase rele | UMNK88_RS09945 | Not Available | Negative | 1936689 - 1936976 | 11225.8 |
| type ii toxin-antitoxin system antitoxin relb | UMNK88_RS09950 | Not Available | Negative | 1936976 - 1937215 | 9072.01 |
| protein ydfv | UMNK88_RS30400 | Not Available | Positive | 1937240 - 1937545 | 11308.8 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





