Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein ynfn | UMNK88_RS33830 | Not Available | Negative | 1929295 - 1929525 | 8328.22 |
| small protein ynfr | UMNK88_RS33835 | Not Available | Negative | 1929530 - 1929595 | 2321.93 |
| cold-shock protein | UMNK88_RS30390 | Not Available | Negative | 1929598 - 1929786 | 7141.65 |
| Csp | UMNK88_RS09890 | Not Available | Negative | 1929797 - 1930009 | 7684.14 |
| Phage-tail assembly-like protein | UMNK88_RS09895 | Not Available | Negative | 1930373 - 1930870 | 18267.8 |
| Endolysin | UMNK88_RS09900 | Not Available | Negative | 1930867 - 1931400 | 19663.6 |
| Hypothetical protein | UMNK88_RS09905 | Not Available | Negative | 1931397 - 1931708 | 12091.3 |
| Holin protein | UMNK88_RS09910 | Not Available | Negative | 1931713 - 1931928 | 7741.44 |
| putative zinc-binding protein ynfu | UMNK88_RS34770 | Not Available | Positive | 1932148 - 1932318 | 6372.68 |
| Csp | UMNK88_RS09915 | Not Available | Negative | 1932682 - 1932897 | 7717.12 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





