Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| capsid protein | UMNK88_RS35400 | Not Available | Negative | 1902648 - 1902765 | 4482.53 |
| ynam/ynft family protein | UMNK88_RS33820 | Not Available | Positive | 1903081 - 1903194 | 4013.06 |
| Hypothetical protein | UMNK88_RS09725 | Not Available | Positive | 1903263 - 1903496 | 8778.78 |
| Recombinase family protein | UMNK88_RS09730 | Not Available | Positive | 1903813 - 1904403 | 21918.8 |
| Qin prophage | UMNK88_RS09735 | Not Available | Negative | 1904501 - 1905076 | 21281.8 |
| Side tail fiber | UMNK88_RS30385 | Not Available | Negative | 1905076 - 1908183 | 103013.0 |
| Putative lom-like outer membrane protein | UMNK88_RS09755 | Not Available | Negative | 1908248 - 1908847 | 21696.9 |
| Putative tail tip assembly protein | UMNK88_RS09760 | Not Available | Negative | 1908915 - 1912394 | 127266.0 |
| Tail component | UMNK88_RS09765 | Not Available | Negative | 1912455 - 1913027 | 19489.6 |
| Tail fiber component | UMNK88_RS09770 | Not Available | Negative | 1913024 - 1913767 | 28117.1 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





