Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Qin prophage | UMNK88_RS07150 | Not Available | Positive | 1404107 - 1404691 | 21753.3 |
| hypothetical protein | UMNK88_RS35390 | Not Available | Positive | 1404664 - 1404801 | 5261.65 |
| class i sam-dependent methyltransferase | UMNK88_RS07155 | Not Available | Negative | 1404746 - 1405414 | 24478.3 |
| Tail fiber assembly protein | UMNK88_RS07160 | Not Available | Positive | 1405564 - 1405737 | 6564.53 |
| spermidine/putrescine abc transporter permease potb | UMNK88_RS07165 | Not Available | Negative | 1405970 - 1406833 | 32398.4 |
| Gp245 | UMNK88_RS07170 | Not Available | Negative | 1406817 - 1407953 | 43044.8 |
| Attr | Not Available | Not Available | Positive | 1413659 - 1413670 | Not Available |
| Attl | Not Available | Not Available | Positive | 1616995 - 1617016 | Not Available |
| Integrase | UMNK88_RS08270 | Not Available | Positive | 1617020 - 1618219 | 45384.3 |
| hypothetical protein | UMNK88_RS30290 | Not Available | Negative | 1618177 - 1618395 | 8088.12 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





