Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative tail assembly chaperone | UMNK88_RS07090 | Not Available | Positive | 1390686 - 1391057 | 13956.7 |
| Tail protein | UMNK88_RS07095 | Not Available | Positive | 1391069 - 1391359 | 10806.1 |
| Tail length tape measure protein | UMNK88_RS35225 | Not Available | Positive | 1391405 - 1394636 | 111146.0 |
| Minor tail protein | UMNK88_RS07105 | Not Available | Positive | 1394614 - 1394970 | 13732.2 |
| Tail component | UMNK88_RS07110 | Not Available | Positive | 1394970 - 1395668 | 25646.0 |
| Tail fiber component | UMNK88_RS07115 | Not Available | Positive | 1395673 - 1396416 | 28335.4 |
| Tail assembly protein | UMNK88_RS07120 | Not Available | Positive | 1396413 - 1396955 | 18858.0 |
| Tail:host specificity protein | UMNK88_RS07125 | Not Available | Positive | 1397016 - 1400411 | 124572.0 |
| Putative lom-like outer membrane protein | UMNK88_RS07130 | Not Available | Positive | 1400479 - 1401078 | 21746.9 |
| Tail fiber protein | UMNK88_RS30190 | Not Available | Positive | 1401143 - 1404107 | 99170.8 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





