Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Bacteriophage antiterminator protein q | UMNK88_RS06990 | Not Available | Positive | 1379241 - 1379930 | 26413.7 |
| Trna-ile; | Not Available | Not Available | Positive | 1380125 - 1380200 | Not Available |
| Trna-lys; | Not Available | Not Available | Positive | 1380202 - 1380278 | Not Available |
| Trna-thr; | Not Available | Not Available | Positive | 1380281 - 1380357 | Not Available |
| Trna-gly; | Not Available | Not Available | Positive | 1380361 - 1380435 | Not Available |
| Putative holin | UMNK88_RS07015 | Not Available | Positive | 1381094 - 1381486 | 13144.1 |
| Putative holin | UMNK88_RS07020 | Not Available | Positive | 1381476 - 1381751 | 10513.5 |
| Putative endolysin | UMNK88_RS07025 | Not Available | Positive | 1381754 - 1382131 | 14128.9 |
| Hypothetical protein | UMNK88_RS07030 | Not Available | Positive | 1382371 - 1382721 | 13155.7 |
| Terminase small subunit | UMNK88_RS07035 | Not Available | Positive | 1383032 - 1383352 | 11716.9 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





