Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hok/gef family protein | UMNK88_RS27250 | Not Available | Positive | 42214 - 42366 | 5817.59 |
| hypothetical protein | UMNK88_RS27255 | Not Available | Negative | 42438 - 42689 | 9225.05 |
| is66-like element accessory protein tnpa | UMNK88_RS27260 | Not Available | Positive | 43422 - 44072 | 24222.3 |
| is66 family insertion sequence element accessory protein tnpb | UMNK88_RS27265 | Not Available | Positive | 44072 - 44419 | 13128.1 |
| is66-like element is679 family transposase | UMNK88_RS27270 | Not Available | Positive | 44439 - 46010 | 58653.2 |
| hypothetical protein | UMNK88_RS34515 | Not Available | Negative | 46326 - 46502 | 6835.24 |
| heat repeat domain-containing protein | UMNK88_RS27285 | Not Available | Positive | 46894 - 47103 | 7746.56 |
| plasmid inci1-type surface exclusion protein exca | UMNK88_RS27290 | Not Available | Negative | 47175 - 47837 | 25757.3 |
| dota/tray family protein | UMNK88_RS27295 | Not Available | Negative | 47908 - 50076 | 77030.8 |
| inci1-type conjugal transfer protein trax | UMNK88_RS27300 | Not Available | Negative | 50173 - 50757 | 22520.7 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





