Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division inhibition protein dicb | UMNK88_RS06885 | Not Available | Negative | 1369622 - 1369810 | 6964.7 |
| hypothetical protein | UMNK88_RS06895 | Not Available | Positive | 1370373 - 1370606 | 8883.8 |
| Hypothetical protein | UMNK88_RS06900 | Not Available | Negative | 1370584 - 1370991 | 14884.7 |
| protein ydfc | UMNK88_RS06905 | Not Available | Negative | 1371014 - 1371232 | 8427.02 |
| hypothetical protein | UMNK88_RS34335 | Not Available | Negative | 1371304 - 1371603 | 11250.7 |
| Prophage repressor | UMNK88_RS06920 | Not Available | Negative | 1371930 - 1372349 | 16258.5 |
| Prophage antirepressor | UMNK88_RS06925 | Not Available | Positive | 1372450 - 1372731 | 10601.7 |
| Putative cii repressor | UMNK88_RS06930 | Not Available | Positive | 1372715 - 1373140 | 15924.2 |
| Primosomal protein i | UMNK88_RS06935 | Not Available | Positive | 1373212 - 1374282 | 39709.3 |
| Lygf | UMNK88_RS06940 | Not Available | Positive | 1374323 - 1374748 | 16342.7 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





