Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tyrosine-type recombinase/integrase | UMNK88_RS05115 | Not Available | Positive | 1039682 - 1040674 | 37938.9 |
| Attr | Not Available | Not Available | Positive | 1040758 - 1040777 | Not Available |
| Dimethyl sulfoxide reductase dmsa | UMNK88_RS05120 | Not Available | Positive | 1040974 - 1043418 | 90410.7 |
| Anaerobic dimethyl sulfoxide reductase subunit b | UMNK88_RS05125 | Not Available | Positive | 1043429 - 1044046 | 22870.1 |
| Dmso reductase anchor subunit c | UMNK88_RS05130 | Not Available | Positive | 1044048 - 1044911 | 30874.2 |
| Attl | Not Available | Not Available | Positive | 1365075 - 1365086 | Not Available |
| Integrase | UMNK88_RS06865 | Not Available | Negative | 1365453 - 1366571 | 42625.3 |
| excisionase | UMNK88_RS06870 | Not Available | Negative | 1366540 - 1366809 | 10185.4 |
| 3'-5' exoribonuclease | UMNK88_RS06875 | Not Available | Negative | 1366871 - 1369341 | 92348.1 |
| lysis protein ydfd | UMNK88_RS06880 | Not Available | Negative | 1369434 - 1369625 | 6842.35 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





