Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Capsid scaffolding protein | UMNK88_RS05020 | Not Available | Negative | 1024435 - 1025271 | 30677.0 |
| Helix-turn-helix domain-containing protein | UMNK88_RS05025 | Not Available | Positive | 1025426 - 1027177 | 66797.4 |
| Pbsx family portal protein | UMNK88_RS05030 | Not Available | Positive | 1027177 - 1028223 | 39285.1 |
| Hypothetical protein | UMNK88_RS05035 | Not Available | Negative | 1028717 - 1030942 | 81952.0 |
| Atp-dependent zinc metalloprotease | UMNK88_RS05040 | Not Available | Negative | 1030966 - 1032087 | 41960.8 |
| Replication protein | UMNK88_RS05045 | Not Available | Negative | 1032268 - 1035033 | 105017.0 |
| Hypothetical protein | UMNK88_RS05050 | Not Available | Negative | 1035040 - 1035405 | 13862.7 |
| Derepression protein | UMNK88_RS34660 | Not Available | Negative | 1035478 - 1035708 | 9072.99 |
| Regulatory protein rha | UMNK88_RS34665 | Not Available | Negative | 1035750 - 1036019 | 9654.73 |
| Hypothetical protein | UMNK88_RS05060 | Not Available | Negative | 1036031 - 1036330 | 11322.7 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





