Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative transposase | UMNK88_RS04965 | Not Available | Negative | 1018264 - 1019478 | 46343.1 |
| Tail protein | UMNK88_RS04975 | Not Available | Negative | 1019535 - 1019999 | 18452.8 |
| Tail completion protein | UMNK88_RS04980 | Not Available | Negative | 1019992 - 1020459 | 17713.7 |
| Hypothetical protein | UMNK88_RS04985 | Not Available | Negative | 1020597 - 1021004 | 14881.5 |
| M15 family metallopeptidase | UMNK88_RS04990 | Not Available | Negative | 1021001 - 1021393 | 14688.4 |
| Holin family protein | UMNK88_RS04995 | Not Available | Negative | 1021390 - 1021713 | 11376.8 |
| Tail protein x | UMNK88_RS05000 | Not Available | Negative | 1021716 - 1021916 | 7479.97 |
| Head completion/stabilization protein | UMNK88_RS05005 | Not Available | Negative | 1021916 - 1022410 | 18447.6 |
| Small terminase subunit | UMNK88_RS05010 | Not Available | Negative | 1022513 - 1023313 | 28989.7 |
| Major capsid protein | UMNK88_RS05015 | Not Available | Negative | 1023359 - 1024411 | 39290.5 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





