Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Recombinase family protein | UMNK88_RS04920 | Not Available | Negative | 1012091 - 1012690 | 22370.2 |
| Tail protein | UMNK88_RS29995 | Not Available | Positive | 1012719 - 1013105 | 13455.2 |
| Tail fiber assembly protein | UMNK88_RS04925 | Not Available | Positive | 1013107 - 1013550 | 16522.2 |
| Putative tail fiber assembly protein | UMNK88_RS04930 | Not Available | Negative | 1013522 - 1014124 | 21740.1 |
| Phage tail fiber protein | UMNK88_RS04935 | Not Available | Negative | 1014124 - 1015625 | 52477.4 |
| Tail protein i | UMNK88_RS04940 | Not Available | Negative | 1015622 - 1016230 | 22820.3 |
| Baseplate j/gp47 family protein | UMNK88_RS04945 | Not Available | Negative | 1016223 - 1017119 | 31868.7 |
| Lysozyme family baseplate assembly protein | UMNK88_RS04950 | Not Available | Negative | 1017123 - 1017473 | 12874.7 |
| Baseplate assembly protein v | UMNK88_RS04955 | Not Available | Negative | 1017470 - 1018036 | 19503.2 |
| Tail protein | UMNK88_RS04960 | Not Available | Negative | 1018048 - 1018221 | 6331.53 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





