Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Variable tail fiber protein | UMNK88_RS04560 | Not Available | Positive | 938211 - 939740 | 53210.5 |
| Putative tail fiber assembly protein | UMNK88_RS04565 | Not Available | Positive | 939740 - 940342 | 21761.0 |
| Tail fiber assembly protein | UMNK88_RS04570 | Not Available | Negative | 940314 - 940757 | 16646.4 |
| Tail fiber protein | UMNK88_RS04575 | Not Available | Negative | 940778 - 941188 | 14431.2 |
| Recombinase family protein | UMNK88_RS04580 | Not Available | Positive | 941219 - 941785 | 21054.6 |
| Major tail sheath protein | UMNK88_RS04585 | Not Available | Positive | 941928 - 943100 | 42341.2 |
| Major tail tube protein | UMNK88_RS04590 | Not Available | Positive | 943110 - 943625 | 18846.4 |
| Phage tail assembly protein | UMNK88_RS04595 | Not Available | Positive | 943680 - 943982 | 10869.5 |
| Gpe familygtail protein | UMNK88_RS04600 | Not Available | Positive | 943997 - 944116 | 4489.32 |
| Tail tape measure protein | UMNK88_RS04605 | Not Available | Positive | 944109 - 947186 | 108791.0 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





