Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Lysozyme | UMNK88_RS04515 | Not Available | Positive | 933436 - 933948 | 18651.6 |
| Hypothetical protein | UMNK88_RS04520 | Not Available | Positive | 933950 - 934327 | 14035.0 |
| Lysb familyglysis regulatory protein | UMNK88_RS04525 | Not Available | Positive | 934324 - 934752 | 15862.8 |
| P2 lysc-like protein | UMNK88_RS34650 | Not Available | Positive | 934637 - 934885 | 8891.58 |
| Tail protein | UMNK88_RS04530 | Not Available | Positive | 934848 - 935279 | 16058.0 |
| Putative phage tail protein | UMNK88_RS04535 | Not Available | Positive | 935272 - 935718 | 17213.9 |
| Baseplate assembly protein v | UMNK88_RS04540 | Not Available | Positive | 935787 - 936365 | 20866.7 |
| Phage baseplate assembly protein | UMNK88_RS04545 | Not Available | Positive | 936362 - 936721 | 12963.6 |
| Baseplate assembly protein | UMNK88_RS04550 | Not Available | Positive | 936708 - 937616 | 32623.8 |
| Tail protein i | UMNK88_RS04555 | Not Available | Positive | 937609 - 938214 | 22503.8 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





