Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | UMNK88_RS27200 | Not Available | Positive | 31691 - 31897 | 7749.17 |
| helix-turn-helix transcriptional regulator | UMNK88_RS27205 | Not Available | Negative | 31928 - 32179 | 9909.82 |
| hypothetical protein | UMNK88_RS35470 | Not Available | Negative | 32213 - 32410 | 7346.11 |
| duf4942 domain-containing protein | UMNK88_RS27215 | Not Available | Positive | 32759 - 33607 | 32116.5 |
| molybdopterin-guanine dinucleotide biosynthesis protein mobc | UMNK88_RS27220 | Not Available | Negative | 33693 - 34028 | 12432.7 |
| inci1-type relaxosome accessory protein nika | UMNK88_RS27225 | Not Available | Positive | 34262 - 34594 | 12614.3 |
| inci1-type relaxase nikb | UMNK88_RS27230 | Not Available | Positive | 34605 - 37304 | 103840.0 |
| f-type conjugative transfer protein trbc | UMNK88_RS27235 | Not Available | Negative | 37341 - 39632 | 86904.0 |
| inci1-type conjugal transfer protein trbb | UMNK88_RS27240 | Not Available | Negative | 39625 - 40695 | 39543.4 |
| inci1-type conjugal transfer protein trba | UMNK88_RS27245 | Not Available | Negative | 40714 - 41922 | 46020.0 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





