Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | UMNK88_RS04465 | Not Available | Positive | 924251 - 924787 | 20232.0 |
| Hypothetical protein | UMNK88_RS04470 | Not Available | Positive | 925155 - 926936 | 67117.0 |
| Portal protein | UMNK88_RS04475 | Not Available | Negative | 926977 - 928002 | 38709.6 |
| Terminase atpase subunit family protein | UMNK88_RS04480 | Not Available | Negative | 928002 - 929768 | 67064.4 |
| Gpo family capsid scaffolding protein | UMNK88_RS04485 | Not Available | Positive | 929911 - 930744 | 30588.8 |
| Major capsid protein, p2 family | UMNK88_RS04490 | Not Available | Positive | 930761 - 931819 | 39152.4 |
| Terminase endonuclease subunit | UMNK88_RS04495 | Not Available | Positive | 931823 - 932473 | 23777.6 |
| Head completion/stabilization protein | UMNK88_RS04500 | Not Available | Positive | 932569 - 933033 | 17670.8 |
| Tail protein x | UMNK88_RS04505 | Not Available | Positive | 933033 - 933236 | 7592.02 |
| Holin | UMNK88_RS04510 | Not Available | Positive | 933240 - 933455 | 8113.98 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





